Chromatography Data System (CDS)

Themo ScientificTM Chromeleon 7 series CDS:

  • One CDS for all chromatography laboratories-routine, development, or research-regulated or not.
  • One CDS for third party GC and HPLC instruments and all of Thermo Scientific GC, HPLC,IC, and recent GC-MS and LC-MS instruments.
  • One CDS for standalone instruments, networked laboratories and multi-site enterprise deployment while keeping the same user experience.
  • Simplified run creation, including sequence, methods and reports, with one-click eWorkflows procedures.
  • Quick, accurate peak integration with Cobra Peak Detection and handling of unresolved peaks with SmartPeaksTM Integration Assistant.


AppsLab Library

Thermo ScientificTM AppsLab Library of Analytical Applications is a chromatographer’s web-portal to our comprehensive application expertise. This open, free-of-charge repository with over 1,000 methods available today is being constantly updated with new applications.

Chromatographers can download complete applications enabling them to recreate the method or their existing hardware and chromatography data system. Having information on methods and consumables accessible in one central repository can save significant methods development time.

Thermo ScientificTM Proteome Discover TM software

Identify and quantify proteins in complex biological samples using Thermo Scientific™ Proteome Discoverer™ software. Proteome Discoverer software simplifies a wide range of proteomics workflows, from protein and peptide identification to PTM analysis to isobaric mass tagging and both SILAC and label-free quantitation. It supports multiple database search algorithms (SEQUEST, Z-Core, Mascot, and Byonic) and multiple dissociation techniques (CID, HCD, ETD, and EThcD) for more comprehensive analyses.

Thermo ScientificTM ProteinCenterTM software

For web-based comparison and interpretation of data sets in minutes for biological information

Thermo ScientificTM PinpointTM software

Methods for easy transition from early-stage biomarker discovery to larger-scale, quantitative proteomics

Thermo ScientificTM ProSight PCTM software

For top-down MS/MS protein identification and automated PTM annotation

Thermo ScientificTM ProSight PCTM software

For small molecule identification with customizable nodebased workflows, integrated compounds identification capabilities, and statistical analysis.

Thermo ScientificTM mzCloudTM Advanced Mass Spectral Database

Screening, identification, and quantification of therapeutics, drugs of abuse, toxins, and food and environmental contaminants are faster and more confident with Thermo Scientific™ High-Resolution Accurate-Mass MS/MS Spectral Libraries. Used with Thermo Scientific™ TraceFinder™ software, the libraries provides high-resolution, accurate-mass (HRAM) MS/MS spectra for identification, confirmation, and quantification of thousands of compounds. The libraries can be continually updated from the ever expanding mzCloud™ online repository and customized with lab-specific compounds and spectra.

Thermo ScientificTM LipidSearchTM

Lipidomics is crucial to understanding cellular physiology and pathology, and lipid profiling for disease phenotype analysis is a rapidly growing area in translational medical research. LC/MS is a powerful technique for the identification and quantitation of cellular lipids. The Thermo Scientific™ LipidSearch™ software processes LC-MS data, including the high-resolution accurate-mass data generated by Thermo Scientific™ Orbitrap™ -based mass spectrometers, to provide accurate lipid identification, relative quantitation, and results visualization. It automatically integrates complex data into reports and dramatically reduces data analysis time. 

Thermo ScientificTM BioPharma FinderTM

Screen, identify, and characterize intact proteins with higher productivity and confidence. Confirm amino acid sequence, and identify relative amounts of known/unknown post-translational modifications (PTMs) using the Peptide Mapping workflow. Enable efficient sequence verification, along with identification and localization of modifications by using the automated top-down workflow. All BioPharma Finder software workflows take full advantage of the high-quality, HRAM data produced by Thermo Scientific™ Orbitrap™ mass analyzers.

Thermo ScientificTM SimGlycanTM

Speed the characterization of complex glycans using SimGlycan™ software from PREMIER Biosoft. SimGlycan software processes and interprets the multi-stage/sequential (MSn) data produced by Thermo Scientific™ Mass Spectrometers, a capability essential to determining glycan heterogeneity and isomeric forms. The software automatically matches experimental mass spectra against a comprehensive database and generates a scored list of candidate structures. More relevant information about the proposed structure, including the glycan class, pathway and enzyme, is provided via interactive links.


Thermo ScientificTM TracedinderTM

Routine high-throughput screening and quantitation demands rapid access to confident results where users may have different experience levels.

Increase your productivity through acquiring and processing your targeted screening and routine quantitative data from LC and GC (including multiplexed and third-party systems), Quadrupole and HRAM-MS systems.

Configure with environmental, clinical, food safety, forensics and pharma/biopharma specific nomenclature, to rapidly develop confident methods which are accessible to all with minimal training requirements.


Thermo ScientificTM Mass FrontierTM

Transform your mass spectral data into knowledge quickly and easily using Thermo Scientific™ Mass Frontier™ spectral interpretation software. Take the challenge out of small molecule structural elucidation for metabolism, metabolomics, forensics, natural products, impurities, and degradants studies. High-quality, curated experimental spectral and fragmentation libraries simplify the deconvolution, evaluation, interpretation and management of infusion, and LC, nominal mass, or high resolution mass spectral data. Mass Frontier software complements Thermo Scientific™ Compound Discoverer™ software for routine-based small molecule discovery and identification.


Thermo ScientificTM ToxFinderTM

The ToxFinder application supports screening applications in clinical, toxicology, and forensic laboratories. It processes data for targeted screening applications on triple quadrupole and Orbitrap™ instruments. T. Best suited for automated LC-MS/MS screening in forensic toxicology

Thermo ScientificTM iRCProTM

Processing high volumes of SRM data from Thermo Scientific™ triple quadrupole mass spectrometers is faster, easier, and more accurate with iRC PRO ion ratio calculation software created exclusively for Thermo Fisher Scientific by 2Next srl and Fantoni (Prato, Italy). iRC PRO software operates offline, using ion intensity ratios to calculate the concentrations of target analytes and performing user-defined meta calculations. The software eliminates manual calculations and manual processing, removing common sources of errors in post-analytical data processing.